Re: [ptp-user] Testing for Parallel Package Juno SR2 (RC4 build) ** LSF

[Dave Wootton <dwootton@xxxxxxxxxx>]

Christoph
Right now you need to specify the 'poe'
command as the application in the application tab of the run configuration
then specify the application along with its arguments and the poe arguments
in the arguments tab. If you need to set environment variables you need
to do it in the Environment tab.

If you need more than one node, use
the 'Number of processors' field which is the bsub -n option.

I can add a field to the UI that has
an editable dropdown with parallel command name pre fillled with poe, mpirun,
etc. If that's filled in then I insert that into the bsub command.
Dave



From:      
 Christoph Pospiech
<Christoph.Pospiech@xxxxxxxxxx>
To:      
 ptp-user@xxxxxxxxxxx
Date:      
 02/20/2013 03:52 AM
Subject:    
   Re: [ptp-user]
Testing for Parallel Package Juno SR2 (RC4 build) **      
 LSF support
Sent by:    
   ptp-user-bounces@xxxxxxxxxxx

---

On Wednesday, February 20, 2013 8:30:37 Dr. Christoph
Pospiech wrote:
> Dave,
> 
> now that I could run jobs, I saw <jobname>.err and <jobname>.out
in the
> place  you described. I have a similar wish as I had for LoadL
stdout and
> stderr naming before - could you please add %J to the the default
file
> names ? Like this.
> #BSUB -e $CUR_DIR/$DEFAULT_FILE_NAME.%J.err
> #BSUB -o $CUR_DIR/$DEFAULT_FILE_NAME.%J.out
> 
> I put in $DEFAULT_FILE_NAME as a place holder for whatever you had
in place 
> before.
> 
> This way, each job output gets a new name and doesn't overwrite earlier
job 
> outputs - or well it seems to actually append to earlier job outputs.
But
> still I would like to keep outputs from different jobs separate.
> 
> I tried to experiment with "STDOUT path (new)" - to no avail.

Dave,

I managed to achieve what I wanted by adding
"-o hello.%J.out -e hello.%J.err" to "Other options".
But it would still be 
desirable to have separate option entries for -o and -e.

For some reason, the job queue didn't show up in the inactive jobs list.
I am 
sure I submitted it to queue "i06h", but the job queue was displayed
in the 
inactive job list for all jobs - but mine.

...and where do I specify that I want to run a parallel job ? I am missing
an 
option entry for the -n option. Also, for the LoadL support, there was
a menu 
window where I could choose whether to prepend "poe", "mpirun"
or nothing to 
the executable. I would like to see something similar for LSF.
-- 

Mit freundlichen Grüßen / Kind regards

Dr. Christoph Pospiech
High Performance & Parallel Computing
Phone: +49-351 86269826
Mobile: +49-171-765 5871
E-Mail: christoph.pospiech@xxxxxxxxxx
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