On Wednesday, May 22, 2013 13:10:55 Di Sheng <disheng222@xxxxxxxxx> wrote:
> In addition, I also tried using "MPICH2-generic-interactive", but
> encountered another error as follows.
> "Server finished with exit code 1"
> Please see attached snapshot figure for details.
>
> Do I need to install MPICH2 instead of MPICH3?
Didn't you say, you are using Ubuntu 64bit ? Well, me too (Kubuntu Quantal 12.10). If I want to run locally, I am happily using OpenMPI - because I didn't need to compile any MPI, I only had to install the following *.deb packages (best "sudo apt-get install ...").
cp@sirius:~$ dpkg -l '*mpi[-1]*' | grep ii
ii libhdf5-openmpi-7 1.8.8-9 amd64 Hierarchical Data Format 5 (HDF5) - runtime files - OpenMPI version
ii libopenmpi-dev 1.4.5-1ubuntu1 amd64 high performance message passing library -- header files
ii libopenmpi1.3 1.4.5-1ubuntu1 amd64 high performance message passing library -- shared library
ii openmpi-bin 1.4.5-1ubuntu1 amd64 high performance message passing library -- binaries
ii openmpi-checkpoint 1.4.5-1ubuntu1 amd64 high performance message passing library -- checkpoint support
ii openmpi-common 1.4.5-1ubuntu1 all high performance message passing library -- common files
Then I am using OpenMPI generic interactive - which works for me.
I only have to point the life parser of the Eclipse editor to include /usr/include/openmpi to its include paths. Otherwise constants like MPI_COMM_WORLD are flagged as syntax errors.
> In addition, it seems that there is a typo in your instruction or
> configuration wizard, conflicting to the instruction page (
> http://help.eclipse.org/helios/index.jsp?topic=%2Forg.eclipse.ptp.help%2Fhtm
> l%2F01buildMPIprog.html ),
> in the "configuring resource managers", step 2b, it says: "If you use key
> based authentication, select the Public key based authentication radio
> button, select the file containing your public key, and enter the
> passphrase for your key (or leave blank if you don't use a passphrase)".
> However, in the configuration panel, the "public key" field is shown as
> "private key". To me, "public" key makes sense, but the field only accepts
> "private" key. Any comments? Thanks!
>
> Thanks
> Sheng
Yes, the private key needs to be specified. Perhaps the documentation needs some amendment.
--
Mit freundlichen Grüßen / Kind regards
Dr. Christoph Pospiech
High Performance & Parallel Computing
Phone: +49-351 86269826
Mobile: +49-171-765 5871
E-Mail: christoph.pospiech@xxxxxxxxxx
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