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Re: [ptp-user] Failed to parse output of OpenMPI command
|
Hi Matthew,
I don't think the output you're seeing is the problem. I haven't been
able to reproduce it yet either.
Are you using Remote Tools or RSE for the connection?
Thanks,
Greg
On Aug 6, 2009, at 10:46 AM, Matthew Fotzler wrote:
Hey Greg,
Sure. The output is quite large, so I hope sending as an attachment
is okay. debug.log is the debug output eclipse gives me when I try to
run the job through PTP, and ompi.log is the output I get when I run
from a terminal.
Thanks,
Matthew
On Wed, Aug 5, 2009 at 1:32 PM, Greg Watson<g.watson@xxxxxxxxxxxx>
wrote:
Hi Matthew,
If there's a newline between "</std" and "out>" then it is likely
to be the
problem as XML names cannot contain whitespace. Can you send the
actual
output from POP at this point?
Thanks,
Greg
On Aug 5, 2009, at 12:48 PM, Matthew Fotzler wrote:
Hi,
I'm using PTP 3.0 from CVS and OpenMPI 1.4a1r21763 (yesterday's
nightly build). I'm trying to run the Parallel Ocean Program
remotely
and am receiving the following:
org.eclipse.core.runtime.CoreException: Failed to parse output of
Open
MPI command. Check output for errors.
at
org
.eclipse
.ptp
.rm
.mpi
.openmpi.core.OpenMPIPlugin.coreErrorException(OpenMPIPlugin.java:
86)
at
org
.eclipse
.ptp
.rm
.mpi
.openmpi
.core
.rtsystem
.OpenMPIRuntimeSystemJob
.doWaitExecution(OpenMPIRuntimeSystemJob.java:575)
at
org
.eclipse
.ptp
.rm
.core
.rtsystem
.AbstractToolRuntimeSystemJob
.run(AbstractToolRuntimeSystemJob.java:258)
at org.eclipse.core.internal.jobs.Worker.run(Worker.java:55)
Caused by: java.io.IOException: The element type "stdout" must be
terminated by the matching end-tag "</stdout>".
at
org
.eclipse
.ptp
.rm
.mpi
.openmpi
.core
.rtsystem
.OpenMPIProcessMapXml13Parser
.parse(OpenMPIProcessMapXml13Parser.java:518)
at
org
.eclipse.ptp.rm.mpi.openmpi.core.rtsystem.OpenMPIRuntimeSystemJob
$1.run(OpenMPIRuntimeSystemJob.java:232)
Looking at the debug output, I see some lines that look like:
RTS job #100663327: <stdout
rank
=
"0
">
------------------------------------------------------------------------

;</std
RTS job #100663327:
RTS job #100663327: out>
I'm not sure if these are the culprit or not. Any ideas what
might be
causing this?
Thanks,
Matthew Fotzler
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<debug.log><ompi.log>_______________________________________________
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