Project Plan For Spatio-Temporal Epidemiological Modeler, version 2.0.0

Introduction

The Spatiotemporal Epidemiological Modeler (STEM) tool is designed to help scientists and public health officials create and use spatial and temporal models of emerging infectious diseases. These models could aid in understanding, and potentially preventing, the spread such diseases.

Release Deliverables

STEM is delivered as an Eclipse Rich Client Platform (RCP) application runnable on Windows, Linux, and Mac OS X platforms. It requires a Java 6 or later JVM. The STEM application includes tools for designing, simulating, and analyzing epidemiological models. STEM contains a wealth of prepackaged data in the form of existing disease models and simulations as well as geographic/demographic data for the world.

The 2.0.0 release planning:

  • Integrated UI for creating new models of disease including domain specific language for epi modeling
  • parameter sensitivity analysis
  • mcmc optimizer
  • New Food Distribution Analysis view (incubation)
  • New Apache library

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Release Milestones

Here is the timeline for the current STEM release cycle.
1.2.209/07/2011
Release 1.2.2
1.2.311/21/2011
Release 1.2.3
1.3.002/07/2012
Release 1.3.0
1.3.105/01/2012
Release 1.3.1
1.4.009/25/2012
Release 1.4.0
1.4.112/14/2012
Release 1.4.1
2.0.0 M104/02/2013
2.0.0 M1 (milestone complete)
2.0.0 M205/13/2013
2.0.0 M2 (milestone complete)
2.0.0 M306/18/2013
2.0.0 M2 (planned milestone)
2.0.010/15/2013
Release 2.0.0 (planned release)

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Target Environments

STEM runs on 32-bit and 64-bit Windows, Linux, and Mac OS X platforms. It is built using Eclipse 3.6 and requires Java 6 or later.

Internationalization

STEM currently has partial National Language Support for several languages. NLS resources for STEM are managed through Eclipse Babel and additional translations can be contributed through the Babel Project (http://eclipse.org/babel/).

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Compatibility with Previous Releases

STEM 1.4.1 supports models and scenarios created using STEM 1.4.0 release.

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Themes and Priorities

Work with users to extend STEM to support work on the most important current problems in epidemiology and public health.

Hiding Complexity

In 2013 we will work to hide the complexity of Eclipse EMF and make is easy for any subject matter expert to create new models.

Food borne Disease

We will continues to evolve the STEM framework to support modeling of food production and food borne diseases

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